Metagenopolis (MGP)

The 20 latest publications

Title Authors Publication date Source
Fusobacterium nucleatum promotes inflammatory and anti-apoptotic responses in colorectal cancer cells via ADP-heptose release and ALPK1/TIFA axis activation Joël Doré, Hervé M. Blottière 01/01/24 Gut Microbes
Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide Emmanuelle Le Chatelier, Magali Berland, Hervé M. Blottière, Angélique Doré, Sébastien Fromentin, Nicolas Pons, Hanna Julienne, Véronique Léjard, Florence Levenez, Robin Massey, Nicolas Maziers, Laetitia Pasero Le Pavin, Thierry Vanduyvenboden 12/01/23 Nature Communications
Multicenter evaluation of gut microbiome profiling by next-generation sequencing reveals major biases in partial-length metabarcoding approach Hugo Roume, Joël Doré 12/01/23 Scientific Reports
The bacterial species profiles of the lingual and salivary microbiota differ with basic tastes sensitivity in human Sébastien Fromentin, Christian Morabito, Benoît Quinquis, Nicolas Pons, Hervé M. Blottière 12/01/23 Scientific Reports
The gut microbiota in multiple sclerosis varies with disease activity Florence Thirion, Nicolas Pons, Florence Levenez, Benoît Quinquis, Stanislav Dusko Ehrlich 12/01/23 Genome Medicine
An Insight into Functional Metagenomics: A High-Throughput Approach to Decipher Food–Microbiota–Host Interactions in the Human Gut Elliot Mathieu, Véronique Léjard, Chaima Ezzine, Pauline Govindin, Aurélien Morat, Margot Giat, Joël Doré, Hervé M. Blottière 12/01/23 International Journal of Molecular Sciences
Evaluation of an Adapted Semi-Automated DNA Extraction for Human Salivary Shotgun Metagenomics Victoria Meslier, Aymeric David, Christian Morabito, Alexandre Famechon, Benoît Quinquis, Mathieu Almeida 10/01/23 Biomolecules
Adlercreutzia equolifaciens Is an Anti-Inflammatory Commensal Bacterium with Decreased Abundance in Gut Microbiota of Patients with Metabolic Liver Disease Florian Plaza Oñate, Joël Doré, Hervé M. Blottière 08/01/23 International Journal of Molecular Sciences
A microbiota-modulated checkpoint directs immunosuppressive intestinal T cells into cancers Giacomo Vitali, Nathalie Galleron, Benoît Quinquis, Emmanuelle Le Chatelier 06/09/23 Science
Oral and periodontal assessment at the first trimester of pregnancy: The PERISCOPE longitudinal study Camille Champion 06/01/23 Acta Obstetricia et Gynecologica Scandinavica
In vitro modelling of oral microbial invasion in the human colon Victoria Meslier, Aymeric David, Sarah Jegou, Christian Morabito, Benoît Quinquis, Florence Thirion, Florian Plaza Oñate, Emmanuelle Le Chatelier, Stanislav Dusko Ehrlich, Mathieu Almeida 03/01/23 Microbiology spectrum
Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies Joël Doré 01/26/23 Nature
Both Disease Activity and HLA–B27 Status Are Associated With Gut Microbiome Dysbiosis in Spondyloarthritis Patients Magali Berland, Victoria Meslier, Samar Berreira Ibraim, Emmanuelle Le Chatelier, Nicolas Pons, Nicolas Maziers, Florence Thirion, Franck Gauthier, Florian Plaza Oñate, Florence Levenez, Nathalie Galleron, Benoît Quinquis, Stanislav Dusko Ehrlich 01/01/23 Arthritis and Rheumatology
Identification of a muropeptide precursor transporter from gut microbiota and its role in preventing intestinal inflammation Joël Doré, Hervé M. Blottière 01/01/23 Proceedings of the National Academy of Sciences of the United States of America
Unveiling Candida albicans intestinal carriage in healthy volunteers: the role of micro- and mycobiota, diet, host genetics and immune response Emmanuelle Le Chatelier 01/01/23 Gut Microbes
Single-Donor and Pooling Strategies for Fecal Microbiota Transfer Product Preparation in Ulcerative Colitis: Systematic Review and Meta-Analysis Joël Doré 01/01/23 Clinical and Translational Gastroenterology
A toolbox of machine learning software to support microbiome analysis Magali Berland 01/01/23 Frontiers in Microbiology
Overview of data preprocessing for machine learning applications in human microbiome research Magali Berland 01/01/23 Frontiers in Microbiology
Advancing microbiome research with machine learning: key findings from the ML4Microbiome COST action Magali Berland 01/01/23 Frontiers in Microbiology
Machine learning approaches in microbiome research: challenges and best practices Stéphane Béreux, Giacomo Vitali, Magali Berland 01/01/23 Frontiers in Microbiology

Number of publications of the laboratory by scientific field (2016-2021)

Every paper can be classified in one or more scientific fields. The figure below shows the lab's number of publications in each scientific field, according to the ASJC classification (Elsevier)