Unité de Recherche Génomique-Info (URGI)

Présentation du laboratoire

Etudier les plantes au niveau génétique et génomique, mieux connaître les pathogènes des végétaux : ce sont les missions des scientifiques de l’URGI, l’Unité de Recherche en Génomique et bio-Informatique, au sein du département Biologie et amélioration des plantes d’INRAE, l’Institut National de Recherche pour l’agriculture, l’alimentation et l’environnement. Implantée à Versailles-Saclay, l’unité de recherche développe des outils et des connaissances sur la structure, le fonctionnement et l’évolution du génome. Elle accueille également la plateforme bio-informatique PlantBioinfoPF.

Les 20 dernières publications

Titre Auteurs Date de publication Source
Between but Not Within-Species Variation in the Distribution of Fitness Effects Patricia Faivre-Rampant 01/11/2023 Molecular Biology and Evolution
How genomics can help biodiversity conservation Florian Maumus 01/07/2023 Trends in Genetics
Endogenous Caulimovirids: Fossils, Zombies, and Living in Plant Genomes Héléna Vassilieff, Nathalie Choisne, Florian Maumus 01/07/2023 Biomolecules
Sidestepping Darwin: horizontal gene transfer from plants to insects Florian Maumus 01/06/2023 Current Opinion in Insect Science
A secreted protease-like protein in Zymoseptoria tritici is responsible for avirulence on Stb9 resistance gene in wheat Reda Amezrou, Colette Audéon, Sandrine Gélisse, Aurélie Ducasse, Nicolas Lapalu, Clémentine Louet, Sabine Fillinger, Thierry C. Marcel 01/05/2023 PLoS Pathogens
SyntenyViewer: a comparative genomics-driven translational research tool Raphaël Flores, Laura Burlot, Mathilde Lain, Erik Kimmel, Cyril Pommier, Michael Alaux, Anne Françoise Adam-Blondon, Hadi Quesneville 01/01/2023 Database : the journal of biological databases and curation
Population-scale long-read sequencing uncovers transposable elements associated with gene expression variation and adaptive signatures in Drosophila Véronique Jamilloux, Hadi Quesneville 01/12/2022 Nature Communications
CAULIFINDER: a pipeline for the automated detection and annotation of caulimovirid endogenous viral elements in plant genomes Sana Haddad 01/12/2022 Mobile DNA
Meeting the Challenges Facing Wheat Production: The Strategic Research Agenda of the Global Wheat Initiative Michael Alaux, Hadi Quesneville 01/11/2022 Agronomy
Multiple Horizontal Acquisitions of Plant Genes in the Whitefly Bemisia tabaci Florian Maumus 01/10/2022 Genome Biology and Evolution
Capturing Wheat Phenotypes at the Genome Level Michael Alaux 04/07/2022 Frontiers in Plant Science
Recent Acquisition of Functional m6A RNA Demethylase Domain in Orchid Ty3/Gypsy Elements Florian Maumus 04/07/2022 Frontiers in Plant Science
ELIXIR biovalidator for semantic validation of life science metadata Philippe Rocca-Serra 01/06/2022 Bioinformatics
Genome-Wide Screening of Transposable Elements in the Whitefly, Bemisia tabaci (Hemiptera: Aleyrodidae), Revealed Insertions with Potential Insecticide Resistance Implications Johann Confais 01/05/2022 Insects
The era of reference genomes in conservation genomics Florian Maumus 01/03/2022 Trends in Ecology and Ecolution
Survival and growth of 711 forest tree taxa in eight French arboretums from three different climate regions Célia Michotey 01/01/2022 Annals of Silvicultural Research
Transposable elements in the genome of the Lichen-forming fungus Umbilicaria pustulata and their distribution in different climate zones along elevation Véronique Jamilloux, Nathalie Choisne 01/01/2022 Biology
Breeding for Economically and Environmentally Sustainable Wheat Varieties: An Integrated Approach from Genomics to Selection Michael Alaux 01/01/2022 Biology
Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp Florian Maumus 01/12/2021 BMC Biology
Author Correction to: Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp (BMC Biology, (2021), 19, 1, (1), 10.1186/s12915-020-00927-9) Florian Maumus 01/12/2021 BMC Biology

Nombre de publications du laboratoire par domaine scientifique (2016-2021)

Chaque publication du laboratoire peut être rangée dans une ou plusieurs disciplines scientifiques : la figure ci-dessus présente le nombre de publications du laboratoire pour chaque discipline de la classification ASJC (Elsevier)